The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis

doi:10.1080/23802359.2020.1721032

IEECAS OpenIR > 生态环境研究室

	The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis
	Xu, Jinshi 1,2; Dang, Han 3; Li, Huaizhu 1
通讯作者	Li, Huaizhu(lihuaizhu121@126.com)
	2020-04-02
发表期刊	MITOCHONDRIAL DNA PART B-RESOURCES
卷号	5 期号:2 页码:1134-1135
摘要	Cirsium shansiense is a common species in China, which can be used for traditional Chinese medicine. The chloroplast (cp) genome of C. shansiense exhibited a typical quadripartite cycle with 152,396 bp, including a pair of inverted repeat regions (IRa and IRb, 25,072 bp each), a large single-copy region (LSC, 83,517 bp), and a small single-copy region (SSC, 18,735 bp). One-hundred-thirty-three unique genes were assembled in the cp genome, including 88 protein genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 17 cp genomes of related species of Asteraceae showed that C. shansiense was closely related to Cirsium vulgare. This study provides important information for identification and conservation of species of Cirsium spp.
关键词	Cirsium shansiense chloroplast genome phylogenetic analysis
DOI	10.1080/23802359.2020.1721032
收录类别	SCI ; SCI
语种	英语
资助项目	Public Health Specialty in the Department of Traditional Chinese Medicine[2016-44] ; Public Health Specialty in the Department of Traditional Chinese Medicine[2017-66] ; Public Health Specialty in the Department of Traditional Chinese Medicine[2018-43] ; Public Health Specialty in the Department of Traditional Chinese Medicine[2019-68] ; Natural Science Basic Research Plan in Shaanxi Province of China[2018JM3021] ; State Key Laboratory of Cotton Biology[CB2018A07] ; China Postdoctoral Science Foundation[2018M643715]
WOS研究方向	Genetics & Heredity
项目资助者	Public Health Specialty in the Department of Traditional Chinese Medicine ; Natural Science Basic Research Plan in Shaanxi Province of China ; State Key Laboratory of Cotton Biology ; China Postdoctoral Science Foundation
WOS类目	Genetics & Heredity
WOS记录号	WOS:000517484000001
出版者	TAYLOR & FRANCIS LTD
引用统计	被引频次：1[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ieecas.cn/handle/361006/12685
专题	生态环境研究室
通讯作者	Li, Huaizhu
作者单位	1.Xianyang Normal Univ, Sch Chem & Chem Engn, Xianyang 712000, Shaanxi, Peoples R China 2.Northwest Univ, Sch Life Sci, Xian, Shaanxi, Peoples R China 3.Chinese Acad Sci, Inst Earth Environm, Xian, Shaanxi, Peoples R China
推荐引用方式 GB/T 7714	Xu, Jinshi,Dang, Han,Li, Huaizhu. The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2020,5(2):1134-1135.
APA	Xu, Jinshi,Dang, Han,&Li, Huaizhu.(2020).The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis.MITOCHONDRIAL DNA PART B-RESOURCES,5(2),1134-1135.
MLA	Xu, Jinshi,et al."The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis".MITOCHONDRIAL DNA PART B-RESOURCES 5.2(2020):1134-1135.